List of modules from raijin:/projects/access/modules for apps in raijin:/projects/access/apps

Note there are a small number of applications in ~access/apps without modules, see list at bottom of page

Module Name	Versions	Owner	Action/Notes	Status
DEPRECATED	2	wml548	Deprecated - to delete
ancil-utils	1	wml548	Required - ancillary production for ASCA, canopy height and etc	canopy_height, varGrid.py OK, ASCAT not working: no conv2nc
ants	8	wml548	0.8.0, 0.9.0, 0.10.0 0.11.0 and 0.12.0 installed on Gadi	0.8.0 under testing
bufrdc	1
cap	9	mrd599, wml548	Required for ancil generation -saw; 9.1 ported-wml548	works for everything except the climatology dataset for variable grids; temporary solution: using raijin image technology & cap9.1 copy of Raijin
cawcr-utils	1	ttl548	Required - various BoM utils
cdat-lite	4		Is this in conda? -saw	cdat6 in bom_envs/python_2.7.16-lwenming
cmake	1		Should be a central module -saw
cms	1	clex	Delteted
conda	1	wml548	See miniconda
cylc	1		Required
drhook	5		Required
dummygrib	1		Required
ecbuild	1	ttl548	Required to build some EC software
eccodes	1		Central module. Required for UM >= vn 11.2
emos340	1	ttl548	Required for GRIB1/BUFR, ../apps/emos to be deleted
fcm	17		Required
fftw	1	ttl548	Central module
gcom	97		Required - new versions needed for Gadi mpi
geos	1		Only required by iris/cartopy?
grib-api	5	ttl548	Central module. Requried for UM <= vn 11.1
hdf5	1		Central module
imagej	1	aph502	Deprecated - to delete
iris	6		Available in Conda
java	2	wml548	Central module: required by trui	java8 works so not required
libmo_unpack	1		Only used by iris so now replaced by conda
libpng	1
magics++	1	ttl548	Required for Metview, ../apps/magics2 to be deleted
mars	6	ttl548	Required for mars-like interface to grib archive
mdssdiff	1	CLEX	Now in conda - deleted
metview	1	ttl548	Required
miniconda	5	wml548	4.3, 4.4, 4.5, 4.6, 4.7 and latest=>4.8 installed
miniconda3	1	wml548	Deprecated - to be replaced by miniconda
mnctools	1	CLEX	Now in conda - to be deleted
moose-client-wrapper	4	wml548	Required	done
mpas	1
mysql	1	ttl548	Deprecated - to delete
ncas-utils	1
nccompress	1	clex	Now in Conda - deleted
nci_admin	1	wml548	Required - managing BOM project resources	done
ncimonitor	1	clex	Now in Conda -deleted
netcdf	1		Central module
netcdf-access	1		Central module
netcdf-fortran	1		Central module
netcdf-fortran-access	1		Central module
ninja	1	aph502	Deprecated - to delete
nmlcompare	1	aph502	Deleted
nmoc-utils	1	ttl548	Required - various BoM utils
nwp_plot	4	wml548	Required - for NWP plotting	done: problems opening grib files
nwp_pytools	?	wml548	Required - for suites, model evaluation and verification	done: renamed as nwptools_py2.YYYYMM
oasis3	1		Requried
oasis3-mct-local	9	mrd599	Required for ACCESS-CM2.
oasis3-mct-longrun	3
obstat	3	ttl548	to be deleted
odb	10	ttl548	Required
odbapi	4
odbserver	0.16.2-ops-intel1903{,-debug}	mjw548	Required for OPS.	Done
openjpeg	1	ttl548	Required
pfunit	3
pio	2
pnetcdf	1
pspline	1	ttl548	Required
py_utils	1	wml548	Required?
rmedtools	1	wml548	Installed	done
robodoc	1	wml548	Required	done
rose	13		Required
rttov	{11.3b,12.3}_ifort1903{,-debug}	mjw548	Required for OPS/VAR	Done
shumlib	7	mrd599	Required for UM vn10.8 to 11.1
sidl	1	saw562	Required for high-res nesting suite
smocs	2	wml548	Not sure
sms	1	wml548	Deprecated - to delete
stash_utils	1	wml548	Required?
suite_audit	1	wml548	Required?
trui	2	wml548	Required	done
um	1		Used by some UMUI versions, incl vn7.3
um2netcdf-niwa	1
ver	1	wml548, vvk548	Required - RMED/GMED
verify	4	ttl548	Deprecated - to delete
verpy	3	wml548	Required - RMED/GMED	done
wrf	1	aph502	Deleted
zlib	1	ttl548	Central module
pythonlib/ARCCSSive	7		Deprecated - Python modules to be replaced with CLEX/BoM Conda environments
pythonlib/Biggus	4		Deprecated - to delete
pythonlib/Cython	1		Deprecated - to delete
pythonlib/FoBiS.py	1		Deprecated - to delete
pythonlib/ImageMetaTag	1		Deprecated - to delete
pythonlib/Jinja2	1		Deprecated - to delete
pythonlib/MarkupSafe	1		Deprecated - to delete
pythonlib/MySQL-python	1	ttl548	Deprecated - to delete
pythonlib/PIL	2		Deprecated - to delete
pythonlib/Pillow	1		Deprecated - to delete
pythonlib/PyYAML	1		Deprecated - to delete
pythonlib/SQLAlchemy	2		Deprecated - to delete
pythonlib/ScientificPython	1		Deprecated - to delete
pythonlib/Shapely	2		Deprecated - to delete
pythonlib/afterburner	2		Deprecated - to delete
pythonlib/ants	8	wml548	see ~/access/apps/ants
pythonlib/backports	1		Deprecated - to delete
pythonlib/backports.ssl_match_hostname	1		Deprecated - to delete
pythonlib/basemap	2		Deprecated - to delete
pythonlib/brewer2mpl	1		Deprecated - to delete
pythonlib/bufr-metadb	1	ttl548	Deprecated - to delete
pythonlib/bufr-transform	1	ttl548	Deprecated - to delete
pythonlib/cartopy	4		Deprecated - to delete
pythonlib/cdat-lite	4		Deprecated - to delete
pythonlib/cf-units	1		Deprecated - to delete
pythonlib/cis	1		Deprecated - to delete
pythonlib/cmor	2		Deprecated - to delete
pythonlib/dask	2		Deprecated - to delete
pythonlib/dataset	1		Deprecated - to delete
pythonlib/decorator	1		Deprecated - to delete
pythonlib/docutils	1		Deprecated - to delete
pythonlib/drslib	1		Deprecated - to delete
pythonlib/enum34	1		Deprecated - to delete
pythonlib/esgf-pyclient	1		Deprecated - to delete
pythonlib/f90nml	6		Deprecated - to delete
pythonlib/functools32	1		Deprecated - to delete
pythonlib/gprof2dot	1		Deprecated - to delete
pythonlib/h5netcdf	1		Deprecated - to delete
pythonlib/h5py	1	wml548	In nwptools_py2.201911	done
pythonlib/ipython	2		Deprecated - to delete
pythonlib/iris	6		Deprecated - to delete
pythonlib/iris_grib	1		Deprecated - to delete
pythonlib/jsonschema	1		Deprecated - to delete
pythonlib/llvmlite	1		Deprecated - to delete
pythonlib/lxml	1		Deprecated - to delete
pythonlib/mask_tools	1		Deprecated - to delete
pythonlib/matplotlib	1		Deprecated - to delete
pythonlib/maybe	1		Deprecated - to delete
pythonlib/mock	1		Deprecated - to delete
pythonlib/mule	7		Deprecated - to delete
pythonlib/netCDF4	1		Deprecated - to delete
pythonlib/nose	1		Deprecated - to delete
pythonlib/numba	1		Deprecated - to delete
pythonlib/numexpr	1		Deprecated - to delete
pythonlib/numpy	2		Deprecated - to delete
pythonlib/pandas	3		Deprecated - to delete
pythonlib/payu	1		Deprecated - to delete
pythonlib/pep8	1		Deprecated - to delete
pythonlib/pip	2		Deprecated - to delete
pythonlib/pp	1		Deprecated - to delete
pythonlib/previous	2		Deprecated - to delete
pythonlib/psutil	1		Deprecated - to delete
pythonlib/pybufr_ecmwf	1	wml548, ttl548	In nwptools_py2.201911	done
pythonlib/pygrib	1		Deprecated - to delete
pythonlib/pyhdf	1		Deprecated - to delete
pythonlib/pyke	1		Deprecated - to delete
pythonlib/pyshp	1		Deprecated - to delete
pythonlib/pyspharm	1		Deprecated - to delete
pythonlib/pytest	2		Deprecated - to delete
pythonlib/python-bufr	1	wml548	required	done
pythonlib/python-common-v2	1		Deprecated - to delete
pythonlib/python2-prereqs	1		Deprecated - to delete
pythonlib/pytz	2		Deprecated - to delete
pythonlib/pyzmq	1		Deprecated - to delete
pythonlib/rpy2	2		Deprecated - to delete
pythonlib/seaborn	1		Deprecated - to delete
pythonlib/sh	1		Deprecated - to delete
pythonlib/singledispatch	1		Deprecated - to delete
pythonlib/six	2		Deprecated - to delete
pythonlib/statsmodels	1		Deprecated - to delete
pythonlib/tables	1		Deprecated - to delete
pythonlib/toolz	2		Deprecated - to delete
pythonlib/tornado	1		Deprecated - to delete
pythonlib/umfile_utils	3	mrd599	required
pythonlib/verpy	1		Deprecated - to delete
pythonlib/virtualtime	1		Deprecated - to delete
pythonlib/windspharm	1		Deprecated - to delete
pythonlib/xarray	2		Deprecated - to delete
pythonlib/xray	2		Deprecated - to delete

List of applications in ~access/apps without module in ../modules

Apps Name	Versions	Owner	Action/Notes	Status
cram
gapi199	1.9.9	ttl548	Deprecated - to delete
jasper	1.9	ttl548	Deprecated - to delete
modules-common-v2.0.tcl
pcmdi_metrics
xconv		saw562	Installed as a module	done
xancil		saw562	Installed as a module	done
xxdiff		wml548	Installed as a module	done
zenity		wml548	Deprecated - to delete