The Layout of the SMOCS svn Repository

SMOCS

--> bin

• job_pool.sh - bash script to run a pool of jobs

--> data

--> APS_names.json - field name dictionary for BoM names

--> doc --> python

--> Collect

• run_mpi_smocs.py - Run smocs collect scripts using mpi4py (replaces job_pool.sh)
• UM_ScanConcat.py - Join individual forecast json files into full forecast json file.
• UM_ScanFile.py - Create a json file with the smocs for a single file.
• UM_ScanTest.py - Test script.
• UM_DecumDir.py - De-accumulate the accumulated precipitation fields for an entire forecast.
• UM_ScanDir.py - Walk through a directory of model history files and create a smocs json file.
• UM_scanSingleTime.py - Do smocs on a single forecast time (deprecated)

--> Harvest

• accumExtrema.py
• cf_smocs_models_term.py
• compareAccums.py
• plot_spinup.py
• audit_fields.py
• coll_health_series.py
• genTimeAccum.py
• sanityCheck.py
• audit_files.py
• compAccumVar.py
• plot_health.py

--> SMOCS (python module with smocs utility scripts)

• binTables.py - Python dictionary for bin table bin limits.
• Classes.py - Classes of smocs statistics
• Collect.py - Common functions for the collect scripts.
• Harvest.py - Common functions for the harvest scripts.
• init.py
• Utils.py - General common functions.

--> scripts

• smocs_collect_bom_mpi.sh - Main rose/cylc suite file to run collect script for Bom environment
• smocs_collect_ncarc.sh - Run collect on NCI model archive directory
• smocs_collect_rose_dir.sh - Main rose/cylcsuite file for NCI environment
• collect_smocs_data.sh
• run_smocs_collect.sh
• redo_smocs_collect.sh
• run_special_collect.sh
• run_collect_expt.sh
• run_subdom_smocs.sh
• test_smocs.sh
• run_dev_ts_collect.sh
• run_ts_smocs_collect.sh

--> tools

• bodoView.py - test smocs file viewer.
• smocsView.py - Updated smocs file viewer